Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
72
66%
Does it follow best practices?
Impact
80%
1.02xAverage score across 3 eval scenarios
Advisory
Suggest reviewing before use
Optimize this skill with Tessl
npx tessl skill review --optimize ./scientific-skills/geo-database/SKILL.mdSecurity
1 medium severity finding. This skill can be installed but you should review these findings before use.
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Third-party content exposure detected (high risk: 0.80). The skill explicitly fetches and parses public, user-submitted GEO content (via GEOparse.get_GEO, NCBI E-utilities like Entrez.esearch/efetch, and direct FTP/wget to ftp.ncbi.nlm.nih.gov) and uses sample/platform metadata (e.g., filtering control/treatment samples) to drive analysis, so untrusted third-party data can influence tool behavior and next actions.
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