This skill should be used when working with LaminDB, an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR. Use when managing biological datasets (scRNA-seq, spatial, flow cytometry, etc.), tracking computational workflows, curating and validating data with biological ontologies, building data lakehouses, or ensuring data lineage and reproducibility in biological research. Covers data management, annotation, ontologies (genes, cell types, diseases, tissues), schema validation, integrations with workflow managers (Nextflow, Snakemake) and MLOps platforms (W&B, MLflow), and deployment strategies.
73
67%
Does it follow best practices?
Impact
74%
1.32xAverage score across 3 eval scenarios
Advisory
Suggest reviewing before use
Optimize this skill with Tessl
npx tessl skill review --optimize ./scientific-skills/lamindb/SKILL.mdSecurity
1 medium severity finding. This skill can be installed but you should review these findings before use.
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Third-party content exposure detected (high risk: 0.90). The skill explicitly ingests open third-party content (e.g., references/integrations.md shows saving artifacts from arbitrary HTTP/HTTPS URLs and a REST API example like requests.get("https://api.example.com/data"), references/ontologies.md and annotation-validation.md show bt.lookup(public=True) and bt.import_source() for public ontologies, and HuggingFace/S3 examples), and those external sources are read/standardized/used in curation and downstream actions (standardize, validate, save artifacts), so untrusted public content can materially influence tool use and decisions.
cbcae7b
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