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find-paper-references

Automatically find references for academic paper Markdown files. Reads full paper text, identifies each knowledge point requiring citation (epidemiological data, mechanism descriptions, existing research conclusions, etc.), searches PubMed for 3-5 most relevant articles per kn...

68

Quality

83%

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SecuritybySnyk

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SKILL.md
Quality
Evals
Security

Quality

Content

81%Weight 40%Scale 1-5

Reviews the quality of instructions and guidance provided to agents. Good implementation is clear, handles edge cases, and produces reliable results.

A highly actionable, well-sequenced workflow with strong validation feedback loops for a batch operation. The main weakness is conciseness: the API-key guidance and the EndNote/Zotero handoff are each stated multiple times and could be deduplicated.

Suggestions

Consolidate the NCBI API Key guidance: keep it in one place (the dedicated section) and have Step 0 reference it, rather than repeating the full instructions in both locations.

State the EndNote/Zotero handoff once (Step 8) and have the Skill Boundary box and 'Next Step' section point to it, instead of re-describing the same downstream skills three times.

Consider moving the dense article-type citation-zone rules and target-count formulas into a short reference file, keeping SKILL.md as the orchestration overview.

DimensionReasoningScore

Conciseness

The bulk is domain-specific and tight, but the NCBI API key is explained twice (Step 0 and a dedicated 'NCBI API Key (Optional)' section) and the EndNote/Zotero handoff is restated three times (Skill Boundary box, Step 8, and the 'Next Step' section), which could be consolidated.

3 / 5

Actionability

Fully executable: a copy-paste bash invocation ('python "SKILL_DIR/scripts/batch_search.py" "%TEMP%\ref_queries.json" --max 5'), a concrete JSON query schema with examples, specific file-naming rules (paper.md → paper_refs.md), and a before/after PMID-insertion example covering common cases.

5 / 5

Workflow Clarity

Steps 0-8 are clearly sequenced with explicit validation and feedback loops: PMID-count checks against the ≥30 (Research) and word-count target range (Review) thresholds that return to Step 2, plus empty-result re-search — satisfying the batch-operation validation requirement.

5 / 5

Progressive Disclosure

A clear Tools section lists the three scripts one level deep with paths referenced in the workflow, and navigation is easy via numbered steps; minor gaps are the dense inline article-type citation rules and the duplicated API-key/handoff sections that could be externalized or consolidated.

4 / 5

Total

17

/

20

Passed

Description

86%Weight 40%Scale 1-5

Based on the skill's description, can an agent find and select it at the right time? Clear, specific descriptions lead to better discovery.

A strong, specific description that names the domain and concrete actions and provides an explicit 'Use when' trigger. Its only gap is trigger-term breadth: adding synonyms (cite, bibliography, literature) and the .md extension would make matching more robust.

DimensionReasoningScore

Specificity

Lists four concrete actions ('Reads full paper text', 'identifies each knowledge point requiring citation', 'searches PubMed for 3-5 most relevant articles', 'inserts [PMID:XXXXXXXX] markers') with comprehensive workflow coverage matching the anchor-5 example.

5 / 5

Completeness

Explicitly answers both 'what' (full read-identify-search-insert action chain) and 'when' ('Use when an academic paper Markdown file needs citations added') with concrete trigger phrases, matching the anchor-5 example.

5 / 5

Trigger Term Quality

Good natural-term coverage (citation, references, academic paper, PubMed, PMID) plus an explicit trigger ('Use when an academic paper Markdown file needs citations added'), but missing common synonyms like 'cite', 'bibliography', 'literature search' and explicit file extensions.

4 / 5

Distinctiveness Conflict Risk

Occupies a clear niche (academic-paper PubMed citation finding) with distinct triggers and minimal overlap risk versus generic document or reference skills.

5 / 5

Total

19

/

20

Passed

Validation

93%

Checks the skill against the spec for correct structure and formatting. All validation checks must pass before discovery and implementation can be scored.

Validation15 / 16 Passed

Validation for skill structure

CriteriaDescriptionResult

frontmatter_unknown_keys

Unknown frontmatter key(s) found; consider removing or moving to metadata

Warning

Total

15

/

16

Passed

Repository
aipoch/medical-research-skills
Reviewed

Table of Contents

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