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tooluniverse-drug-target-validation

Quantitative drug-target validation pipeline. Scores druggability, selectivity, safety profile, ADMET feasibility, and structural tractability with a composite Target Validation Score (0-100) and GO/NO-GO recommendation. Use for go/no-go decisions on a target before commit-to-medchem, target prioritization across a list, and target-deselection rationale.

Quality

88%

Does it follow best practices?

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SecuritybySnyk

Low

Low-risk findings worth noting

SKILL.md
Quality
Evals
Security

Quality

Content

77%Weight 40%Scale 1-5

Reviews the quality of instructions and guidance provided to agents. Good implementation is clear, handles edge cases, and produces reliable results.

A well-sequenced, highly actionable pipeline with strong validation checkpoints, but progressive disclosure is broken: the four referenced companion files do not exist in the bundle, and detail that belongs in them is inlined in SKILL.md. Fixing the missing references would raise both the progressive_disclosure and actionability scores.

Suggestions

Ship the four referenced files (SCORING_CRITERIA.md, REPORT_TEMPLATE.md, TOOL_REFERENCE.md, QUICK_START.md) in the skill bundle, or remove the references and inline the essential scoring math — currently the links dead-end.

Move the ADMET endpoint table, the KLIFS Phase 2b detail, and the ML attribution example table into TOOL_REFERENCE.md/REPORT_TEMPLATE.md to slim the main file to an overview.

Give Phase 6 the same concrete treatment as other phases: specific thresholds or outputs for "pathway redundancy, compensation risk, feedback loops" instead of an unmethodized 'Assess' directive.

DimensionReasoningScore

Conciseness

The body is dense and token-efficient: tool lists with parameter gotchas, tables, and checklists with almost no teaching of concepts Claude already knows. Score 4 rather than 5 because explanatory prose blocks (the KLIFS "Why DFG/alphaC state matters" paragraph, the four-gate rationale paragraphs) could be tightened or moved to a reference file; not 3 since there is no padded or redundant section.

4 / 5

Actionability

Concrete throughout: exact tool names with required parameters flagged ("operation=\"median\" REQUIRED"), known parameter corrections ("param: id, NOT uniprot_id"), a complete executable Python fallback snippet, and example output tables. Not 5 because the score computation itself is delegated entirely to SCORING_CRITERIA.md (absent from the bundle) and Phase 6's "Assess: pathway redundancy, compensation risk, feedback loops" is direction without method; not 3 because the guidance is overwhelmingly executable.

4 / 5

Workflow Clarity

Ten ordered phases with Phase 0 mandatory first, explicit gating ("Do not proceed to Phase 3 (Chemical Matter) before completing Phase 1"), collision detection in Phase 9, a documented MCP-to-SDK fallback chain with failure conditions, and a mandatory Completeness Checklist before finalizing. Matches the 5 anchor: clear sequence, explicit validation steps, feedback loops, and a checklist for a complex process.

5 / 5

Progressive Disclosure

A "Reference Files" section clearly signals four one-level-deep files, but none of them (SCORING_CRITERIA.md, REPORT_TEMPLATE.md, TOOL_REFERENCE.md, QUICK_START.md) exist in the bundle, so navigation dead-ends at runtime. Additionally, substantial detail that belongs in those files (the ADMET endpoint table, the KLIFS sub-guide, the ML attribution table) is inlined. Fits the 3 anchor (content that should be separate is inline; references present but not resolvable) better than 4, whose references must be real and mostly appropriately placed.

3 / 5

Total

16

/

20

Passed

Description

92%Weight 40%Scale 1-5

Based on the skill's description, can an agent find and select it at the right time? Clear, specific descriptions lead to better discovery.

A strong description: third-person voice, concrete quantified capabilities, and an explicit three-trigger "Use for" clause. Only gap is a few natural user phrasings (e.g., "is this a good drug target?") that would broaden trigger coverage.

Suggestions

Add a natural user phrasing to the triggers, e.g. "Use when the user asks 'is [target] a good drug target?' or 'should we pursue this target?'" to broaden keyword coverage.

Consider naming the input (a gene/protein target) explicitly in the "what" clause so the expected input type is unambiguous from the description alone.

DimensionReasoningScore

Specificity

Lists five concrete capabilities ("Scores druggability, selectivity, safety profile, ADMET feasibility, and structural tractability") plus a quantified output ("composite Target Validation Score (0-100) and GO/NO-GO recommendation"). Comprehensive with no generic filler, matching the 5 anchor; it is not 4 because no action is vague or missing.

5 / 5

Completeness

Explicitly answers both: a clear quantified "what" (multi-dimension scoring pipeline with 0-100 score and recommendation) and an explicit "Use for..." clause naming three concrete triggers. Matches the 5 anchor; the "when" is explicit rather than weakly implied, ruling out 4.

5 / 5

Trigger Term Quality

Natural phrases users would say are present: "go/no-go decisions on a target", "target prioritization across a list", "target-deselection rationale". It is not 3 (multiple natural phrasings, not jargon-only) and not 5 because common user phrasings like "Is this a good drug target?" or plain "druggability" are absent.

4 / 5

Distinctiveness Conflict Risk

"before commit-to-medchem" and "target-deselection rationale" carve a distinct validation-decision niche with triggers that do not bleed into general target research or compound profiling. Clear niche with distinct triggers and minimal conflict risk, matching the 5 anchor.

5 / 5

Total

19

/

20

Passed

Validation

100%

Checks the skill against the spec for correct structure and formatting. All validation checks must pass before discovery and implementation can be scored.

Validation — 16 / 16 Passed

Validation for skill structure

No warnings or errors.

Repository

mims-harvard/ToolUniverse

Path

plugin/skills/tooluniverse-drug-target-validation/SKILL.md

Reviewed

Table of Contents

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