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dna-visualization

Publication-quality DNA/RNA visualizations. Plasmid maps (circular/linear), sequence logos, restriction enzyme maps, GC content plots, and gene feature annotation tracks from GenBank/FASTA.

68

Quality

83%

Does it follow best practices?

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SecuritybySnyk

Passed

No findings from the security scan

SKILL.md
Quality
Evals
Security

Quality

Content

85%

Reviews the quality of instructions and guidance provided to agents. Good implementation is clear, handles edge cases, and produces reliable results.

A well-organized, highly actionable skill body with real script references and clear single-command workflows; the main weakness is redundant restatement of the five capabilities across the intro, When-to-Use, and Script Reference sections.

Suggestions

Collapse the triple restatement of the five capabilities: keep the 'When to Use' list and the 'Script Reference' table, and trim the intro paragraph to one line.

Consider moving the pip-install matrix and Style Guide defaults into a short references file to further slim the overview.

DimensionReasoningScore

Conciseness

The body is mostly efficient with executable commands and no conceptual padding, but the five capabilities are restated three times (intro paragraph, the 'When to Use' list, and the 'Script Reference' table), which could be tightened. Not 3 due to that redundancy; not 1 because there is no explanatory fluff about concepts Claude already knows.

2 / 3

Actionability

Each workflow gives fully executable, copy-paste-ready commands with concrete flags (e.g. '--input plasmid.gb --output plasmid_map.png --linear --figsize 10x10 --dpi 300'). Not 2 because the examples are complete and runnable rather than pseudocode.

3 / 3

Workflow Clarity

Each task is a single unambiguous command, which per the simple-skills note can score 3; the operations are non-destructive (rendering outputs) so no validation checkpoint is required. Not 2 because the single action per workflow is explicit and unambiguous.

3 / 3

Progressive Disclosure

The body is organized into clear sections (When to Use, Installation, Core Workflows, Script Reference, Input Formats, Style Guide) and references real one-level-deep bundle files (scripts/draw_plasmid.py, draw_sequence_logo.py, etc., all verified present). Not 2 because references are clearly signaled and shallow, with no nested .md chains.

3 / 3

Total

11

/

12

Passed

Description

82%

Based on the skill's description, can an agent find and select it at the right time? Clear, specific descriptions lead to better discovery.

A specific, third-person description with strong trigger terms and a clear niche, but it omits any explicit 'Use when...' trigger guidance, which caps completeness at 2.

Suggestions

Add an explicit trigger clause, e.g. 'Use when the user asks for plasmid maps, sequence logos, restriction maps, GC content plots, or gene feature tracks from GenBank/FASTA files.'

Optionally mention output formats (PNG/SVG) in the description to sharpen the 'what'.

DimensionReasoningScore

Specificity

Lists multiple concrete actions — 'Plasmid maps (circular/linear), sequence logos, restriction enzyme maps, GC content plots, and gene feature annotation tracks' — matching the score-3 anchor that enumerates several specific capabilities.

3 / 3

Completeness

'What' is explicit (the five visualization types and input formats) but there is no 'Use when...' clause or equivalent trigger guidance, so per the rubric guideline completeness is capped at 2. Not 3 because the 'when' is entirely absent; not 1 because the 'what' is clearly and concretely stated.

2 / 3

Trigger Term Quality

Natural domain terms a user would say are well covered: 'DNA/RNA visualizations', 'plasmid maps', 'sequence logos', 'restriction enzyme maps', 'GC content plots', 'GenBank', 'FASTA'. Not score-2 because it goes beyond a single keyword to the full set of common variations a molecular-biology user would utter.

3 / 3

Distinctiveness Conflict Risk

The niche is clearly DNA/RNA sequence visualization with GenBank/FASTA inputs, unlikely to collide with other skills; the body further disambiguates against SMILES-based molecule-visualization. Not 2 because the domain and input formats are specific enough to avoid overlap.

3 / 3

Total

11

/

12

Passed

Validation

87%

Checks the skill against the spec for correct structure and formatting. All validation checks must pass before discovery and implementation can be scored.

Validation14 / 16 Passed

Validation for skill structure

CriteriaDescriptionResult

metadata_version

'metadata.version' is missing

Warning

frontmatter_unknown_keys

Unknown frontmatter key(s) found; consider removing or moving to metadata

Warning

Total

14

/

16

Passed

Repository
synthetic-sciences/openscience
Reviewed

Table of Contents

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