omero-integration
Securely inspect and automate microscopy data workflows against OMERO.server with omero-py, BlitzGateway, OMERO CLI, tables, annotations, ROIs, rendering, and documented OMERO.web APIs. Use for scoped OMERO inventory, metadata export, import/export planning, or reviewed write workflows.
74
92%
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Low
Low-risk findings worth noting
Low
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
In scripts/export_image_metadata.py, the agent ingests free-text user-controlled metadata fields from the OMERO server (e.g., annotation values, FileAnnotation filenames, and ROI shape text labels via include_* flags) at runtime after explicit image IDs are provided.
- Repository
- K-Dense-AI/scientific-agent-skills
- Commit
36d8f13
- Audited
- Security analysis
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