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pymc

Builds and checks Bayesian models with PyMC, including hierarchical models, NUTS MCMC, variational inference, mutable-data predictions, posterior predictive checks, diagnostics, and PSIS-LOO model comparison. Use for probabilistic modeling and uncertainty inference in PyMC.

Quality

90%

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SKILL.md
Quality
Evals
Security

Quality

Content

92%Weight 40%Scale 1-5

Reviews the quality of instructions and guidance provided to agents. Good implementation is clear, handles edge cases, and produces reliable results.

Excellent body content: highly actionable with verified runnable commands and helper modules, a clearly sequenced scientific workflow with embedded validation checkpoints, and a clean progressive-disclosure structure pointing to real, well-scoped reference files. The only minor deduction is for a few trimmable host-specific and procedural passages.

DimensionReasoningScore

Conciseness

The body is dense with nonobvious, version-specific knowledge (ArviZ 1 package split, DataTree returns, prob= vs legacy argument names, deprecated nuts_sampler_kwargs) rather than general concepts, but a few parts could be trimmed — notably the host-specific macOS PYTENSOR_FLAGS="cxx=" validation note and the lengthy citation instructions.

4 / 5

Actionability

Provides fully copy-paste-ready pinned uv run commands for two runnable templates and executable Python fragments for the bundled helpers (check_diagnostics, compare_models, check_loo_reliability, model_averaging — all verified present in scripts/), covering the common cases.

5 / 5

Workflow Clarity

An 8-step workflow with explicit validation checkpoints (prior predictive check before fitting; rank R-hat, bulk/tail ESS, MCSE, divergences, BFMI screening; posterior predictive inspection) and explicit error-recovery guidance such as "Fix geometry and initialization before simply increasing draws."

5 / 5

Progressive Disclosure

The body acts as a clear overview with well-signaled, one-level-deep references — all five referenced files (standard_workflow.md, workflows.md, model_patterns.md, distributions.md, sampling_inference.md) exist, each introduced with a description of its contents, with scripts and assets appropriately separated.

5 / 5

Total

19

/

20

Passed

Description

83%Weight 40%Scale 1-5

Based on the skill's description, can an agent find and select it at the right time? Clear, specific descriptions lead to better discovery.

A strong description: specific, third-person, clearly scoped to PyMC with an explicit 'Use for...' clause and rich domain-specific trigger terms. The only weakness is that the 'when' guidance mirrors the 'what' rather than enumerating distinct user-mention scenarios, and a few natural synonyms (e.g. 'priors') are absent.

Suggestions

Sharpen the 'when' clause with user-mention triggers, e.g. "Use when the user asks to fit, diagnose, or compare Bayesian models, mentions MCMC, priors, or posterior distributions, or works with PyMC."

Add one or two natural synonyms users commonly say — such as 'priors', 'posterior', or 'Bayesian inference' — to broaden trigger term coverage.

DimensionReasoningScore

Specificity

Lists multiple specific concrete actions — "Builds and checks Bayesian models", "hierarchical models, NUTS MCMC, variational inference, mutable-data predictions, posterior predictive checks, diagnostics, and PSIS-LOO model comparison" — with comprehensive coverage of the skill's capabilities, matching the top anchor.

5 / 5

Completeness

Both 'what' and 'when' are explicitly present ("Use for probabilistic modeling and uncertainty inference in PyMC"), but the 'when' clause largely restates the domain rather than adding explicit user-mention triggers, so it could be more specific.

4 / 5

Trigger Term Quality

Includes many natural user terms ("Bayesian models", "PyMC", "MCMC", "hierarchical", "variational inference", "probabilistic modeling", "uncertainty"), but a few common synonyms such as "priors", "posterior sampling", or "Bayes" are missing, keeping it just below comprehensive coverage.

4 / 5

Distinctiveness Conflict Risk

Clear niche with distinct triggers — the PyMC-specific vocabulary ("NUTS MCMC", "PSIS-LOO", "posterior predictive checks") makes conflict with other skills minimal.

5 / 5

Total

18

/

20

Passed

Validation

100%

Checks the skill against the spec for correct structure and formatting. All validation checks must pass before discovery and implementation can be scored.

Validation — 16 / 16 Passed

Validation for skill structure

No warnings or errors.

Repository

K-Dense-AI/scientific-agent-skills

Path

skills/pymc/SKILL.md

Reviewed

Table of Contents

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