rdkit
Cheminformatics toolkit for fine-grained molecular control. SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure search, 2D/3D generation, similarity, reactions. For standard workflows with simpler interface, use datamol (wrapper around RDKit). Use rdkit for advanced control, custom sanitization, specialized algorithms.
70
86%
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Low
Low-risk findings worth noting
Low
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
The runtime workflow provided by `scripts/*` ingests outsider-authored free text/SDF/SMILES contents from user-supplied command-line arguments (`--file` or positional `smiles/query/pattern`) and passes it directly into RDKit parsers like `Chem.MolFromSmiles`, `Chem.SDMolSupplier`, `Chem.SmilesMolSupplier`, and `Chem.MolFromSmarts` for processing.
- Repository
- K-Dense-AI/scientific-agent-skills
- Commit
9e8b0cb
- Audited
- Security analysis
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