bioinformatics
Gateway to 400+ bioinformatics skills from bioSkills and ClawBio. Covers genomics, transcriptomics, single-cell, variant calling, pharmacogenomics, metagenomics, structural biology, and more. Fetches domain-specific reference material on demand.
58
68%
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Medium
Suggest reviewing before use
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tessl review fix ./optional-skills/research/bioinformatics/SKILL.mdSecurity
1 medium severity finding. This skill can be installed but you should review these findings before use.
W013: Attempt to modify system services in skill instructions.
What this means
The skill prompts the agent to compromise the security or integrity of the user’s machine by modifying system-level services or configurations, such as obtaining elevated privileges, altering startup scripts, or changing system-wide settings.
Why it was flagged
The skill's Environment Setup explicitly asks the user/agent to run "sudo apt install ..." which pushes the agent to obtain sudo privileges and modify system packages.
Low
Low-risk findings.
2 low severity findings. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
SKILL.md instructs runtime cloning and reading of THIRD-PARTY repos (e.g., `git clone ... https://github.com/GPTomics/bioSkills.git` and `.../ClawBio/ClawBio.git`, then `cat .../SKILL.md` / `README.md`), which will be outsider-authored free text ingested into the agent context.
W012: Unverifiable external dependency detected (runtime URL that controls agent).
What this means
The skill fetches instructions or code from an external URL at runtime, and the fetched content directly controls the agent’s prompts or executes code. This dynamic dependency allows the external source to modify the agent’s behavior without any changes to the skill itself.
Why it was flagged
SKILL.md explicitly instructs runtime git clones of remote repos (git clone --depth 1 https://github.com/GPTomics/bioSkills.git and git clone --depth 1 https://github.com/ClawBio/ClawBio.git), and ClawBio contains runnable pipelines so the fetched content can execute code and is a required dependency.
- Repository
- NousResearch/hermes-agent
- Commit
4c9628e
- Audited
- Security analysis
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