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dr-claw

github.com/OpenLAIR/dr-claw

SkillAddedReview
ds-full-pipeline

skills/ds-full-pipeline/SKILL.md

Full DeepScientist research pipeline: scout → baseline → idea → experiment → analysis → optimize → write → review → finalize. End-to-end autonomous research lifecycle.

55

ds-idea

skills/ds-idea/SKILL.md

Use when a quest needs concrete hypotheses, limitation analysis, candidate directions, or a selected idea relative to the active baseline.

60

ds-optimize

skills/ds-optimize/SKILL.md

Use when an algorithm-first quest should manage candidate briefs, optimization frontier, branch promotion, or fusion-aware search instead of the paper-oriented default loop.

55

ds-review

skills/ds-review/SKILL.md

Use when a draft, paper, or paper-like report is substantial enough for an independent skeptical audit before finalization, rebuttal, or revision routing.

59

fine-tuning-with-trl

skills/post-training/trl-fine-tuning/SKILL.md

Fine-tune LLMs using reinforcement learning with TRL - SFT for instruction tuning, DPO for preference alignment, PPO/GRPO for reward optimization, and reward model training. Use when need RLHF, align model with preferences, or train from human feedback. Works with HuggingFace Transformers.

70

gptq

skills/optimization/gptq/SKILL.md

Post-training 4-bit quantization for LLMs with minimal accuracy loss. Use for deploying large models (70B, 405B) on consumer GPUs, when you need 4× memory reduction with <2% perplexity degradation, or for faster inference (3-4× speedup) vs FP16. Integrates with transformers and PEFT for QLoRA fine-tuning.

68

grpo-rl-training

skills/post-training/grpo-rl-training/SKILL.md

Expert guidance for GRPO/RL fine-tuning with TRL for reasoning and task-specific model training

52

guidance

skills/prompt-engineering/guidance/SKILL.md

Control LLM output with regex and grammars, guarantee valid JSON/XML/code generation, enforce structured formats, and build multi-step workflows with Guidance - Microsoft Research's constrained generation framework

59

hqq-quantization

skills/optimization/hqq/SKILL.md

Half-Quadratic Quantization for LLMs without calibration data. Use when quantizing models to 4/3/2-bit precision without needing calibration datasets, for fast quantization workflows, or when deploying with vLLM or HuggingFace Transformers.

63

huggingface-accelerate

skills/distributed-training/accelerate/SKILL.md

Simplest distributed training API. 4 lines to add distributed support to any PyTorch script. Unified API for DeepSpeed/FSDP/Megatron/DDP. Automatic device placement, mixed precision (FP16/BF16/FP8). Interactive config, single launch command. HuggingFace ecosystem standard.

61

huggingface-tokenizers

skills/tokenization/huggingface-tokenizers/SKILL.md

Fast tokenizers optimized for research and production. Rust-based implementation tokenizes 1GB in <20 seconds. Supports BPE, WordPiece, and Unigram algorithms. Train custom vocabularies, track alignments, handle padding/truncation. Integrates seamlessly with transformers. Use when you need high-performance tokenization or custom tokenizer training.

62

init-analysis

skills/bioinformatics-init-analysis/skills/init-analysis/SKILL.md

This skill should be used when the user asks to "run initial analysis", "analyze single-cell data", "QC my data", "run bioinformatics pipeline", "generate analysis report", "explore my dataset", "do exploratory data analysis", "initial data analysis", or needs to perform quality control, dimensionality reduction, clustering, or marker analysis on single-cell biology data (CyTOF, scRNA-seq, flow cytometry, proteomics).

68

inno-code-survey

skills/inno-code-survey/SKILL.md

Acquires missing code repositories for the selected idea (Phase A) and conducts comprehensive code survey mapping academic concepts to implementations (Phase B). Outputs acquired_code_repos, updated_prepare_res, and model_survey for downstream use by inno-implementation-plan.

57

inno-deep-research

skills/inno-deep-research/SKILL.md

Comprehensive research assistant that synthesizes information from multiple sources with citations. Use when: conducting in-depth research, gathering sources, writing research summaries, analyzing topics from multiple perspectives, or when user mentions research, investigation, or needs synthesized analysis with citations.

58

inno-experiment-analysis

skills/inno-experiment-analysis/SKILL.md

This skill should be used when the user asks to "analyze experimental results", "generate results section", "statistical analysis of experiments", "compare model performance", "create results visualization", or mentions connecting experimental data to paper writing. Provides comprehensive guidance for analyzing ML/AI experimental results and generating paper-ready content.

60

inno-experiment-dev

skills/inno-experiment-dev/SKILL.md

Creates implementation plan, writes project code with judge feedback loop, and submits final experiment run. Use after code-survey in both Idea and Plan branches.

59

inno-grant-proposal

skills/inno-grant-proposal/SKILL.md

Help professors and researchers write, revise, adapt, and polish grant proposals for US agencies (NSF, NIH, DOE, DARPA, NASA) and Chinese agencies (NSFC 国自然). Use this skill whenever the user mentions grants, proposals, funding applications, 基金申请, 本子, R01, R21, CAREER, 面上, 青年基金, specific aims, 立项依据, broader impacts, or wants to plan, draft, review, or resubmit any research funding proposal — even if they don't explicitly say "grant". Also use this skill when the user wants to adapt a previous proposal for a new submission. Six-phase workflow: profiling → planning → drafting → quality review → simulated peer review → submission prep.

68

inno-idea-generation

skills/inno-idea-generation/SKILL.md

Facilitates structured brainstorming sessions, conducts comprehensive research, and generates creative solutions using proven frameworks. Trigger keywords - brainstorm, ideate, research, SCAMPER, SWOT, mind map, creative, explore ideas, market research, competitive analysis, innovation, problem solving, feature generation

60

inno-paper-reviewer

skills/inno-paper-reviewer/SKILL.md

Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for actual review writing, manuscript revision. For evaluating claims/evidence quality use scientific-critical-thinking; for quantitative scoring frameworks use scholar-evaluation.

66

inno-paper-writing

skills/inno-paper-writing/SKILL.md

Creates formal academic research papers following IEEE/ACM formatting standards with proper structure, citations, and scholarly writing style. Use when the user asks to write a research paper, academic paper, or conference paper on any topic.

59