gget

gget CLI and Python workflow for quick genomic database queries, sequence lookup, BLAST-style searches, enrichment checks, and reproducible bioinformatics evidence logs.

Quality

91%

Does it follow best practices?

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Securityby

Passed

No known issues

Quality

Content

100%

Reviews the quality of instructions and guidance provided to agents. Good implementation is clear, handles edge cases, and produces reliable results.

The content is a well-structured, executable, and concise overview with clear workflow steps and validation checkpoints, requiring no external bundle files for its scope.

Dimension	Reasoning	Score
Conciseness	The body is lean and code-first, assuming Claude's competence by not explaining what BLAST, Ensembl, or enrichment are; every section earns its place despite minor redundancy between the two Python examples.	3 / 3
Actionability	Provides fully executable, copy-paste-ready commands (e.g. 'gget search -s human brca1 dna repair -o brca1-search.json', 'gget info ENSG00000012048') and runnable Python snippets with concrete flags and identifiers.	3 / 3
Workflow Clarity	A 5-step 'Common workflow' sequence with a 'run a small query first' checkpoint is reinforced by a 7-item 'Review Checklist' that acts as explicit validation for the (read-only) operations.	3 / 3
Progressive Disclosure	No bundle files exist; the single SKILL.md is organized into clear sections with a one-level References list of external links and no nested references, which is appropriate for this self-contained skill.	3 / 3
	Total	12 / 12 Passed

Description

82%

Based on the skill's description, can an agent find and select it at the right time? Clear, specific descriptions lead to better discovery.

The description is specific, third-person, and well-targeted to a distinct bioinformatics niche, but it omits an explicit 'Use when…' trigger clause, which caps its completeness.

Suggestions

Append an explicit 'Use when…' clause naming concrete trigger situations, e.g. 'Use when a task needs quick BLAST, Ensembl ID lookup, or sequence retrieval without a full local pipeline.'

Add a few common natural-language variations users might say (e.g. 'fetch gene sequences', 'look up Ensembl IDs') to reinforce trigger-term coverage.

Briefly signal the boundary (e.g. 'not for clinical interpretation or production pipelines') so it is less likely to be picked for the wrong task.

Dimension	Reasoning	Score
Specificity	Lists multiple specific concrete actions — 'genomic database queries, sequence lookup, BLAST-style searches, enrichment checks, and reproducible bioinformatics evidence logs' — rather than vague language, matching the comprehensive-action anchor.	3 / 3
Completeness	Clearly answers what the skill does but lacks any 'Use when…' clause or equivalent explicit trigger guidance, so per the rubric guideline completeness is capped at 2.	2 / 3
Trigger Term Quality	Uses natural terms a bioinformatics user would actually say — 'sequence lookup', 'BLAST-style searches', 'enrichment checks', 'bioinformatics evidence logs' — giving good coverage rather than only technical jargon.	3 / 3
Distinctiveness Conflict Risk	The gget genomic-database-query niche is specific and unlikely to trigger for unrelated skills, matching the clear-niche anchor.	3 / 3
	Total	11 / 12 Passed

Validation

93%

Warnings & errors only

Checks the skill against the spec for correct structure and formatting. All validation checks must pass before discovery and implementation can be scored.

Validation — 15 / 16 Passed

Validation for skill structure

Criteria	Description	Result
metadata_version	'metadata.version' is missing	Warning

	Total	15 / 16 Passed

Repository: affaan-m/ECC
Commit: 754b8dd

Reviewed: 3 days ago

Table of Contents

Discovery Implementation Validation

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