Structure prediction using OpenFold3, an open-weights PyTorch reproduction of AlphaFold3 from the AlQuraishi Lab. Use this skill when predicting protein/nucleic-acid/ligand complex structures with an Apache-2.0-licensed AF3 reimplementation.
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Low-risk findings worth noting
The skill fetches instructions or code from an external URL at runtime, and the fetched content directly controls the agent’s prompts or executes code. This dynamic dependency allows the external source to modify the agent’s behavior without any changes to the skill itself.
The skill documentation instructs downloading model weights from a Hugging Face repository (OpenFold/OpenFold3) and accessing external servers (ColabFold MSA server and RCSB GraphQL) during runtime, establishing open third-party operational dependencies.
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