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fair-esm2

Use ESM2 protein language models for embeddings, mutation scoring, remote homology, or representation analysis. Use when a task needs protein embeddings, zero-shot variant scores, clustering, or sequence-function triage.

62

Quality

72%

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SecuritybySnyk

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tessl review fix ./skills/fair-esm2/SKILL.md
SKILL.md
Quality
Evals
Security

Quality

Content

57%Weight 40%Scale 1-5

Reviews the quality of instructions and guidance provided to agents. Good implementation is clear, handles edge cases, and produces reliable results.

The body is concise and well-structured as an overview, but it provides only abstract steps with no executable code or commands and no validation checkpoints, which limits actionability and workflow clarity.

Suggestions

Add at least one concrete, copy-paste-ready example (e.g. a Python snippet showing how to load an ESM2 checkpoint and produce embeddings) to lift actionability.

Insert explicit verification steps into the workflow (e.g. 'Confirm the checkpoint hash matches the expected version before running') to satisfy the validation-checkpoint requirement.

Specify the actual package/route names (model names, CLI commands, or API endpoints) rather than the generic 'local package, checkpoint, endpoint, or notebook route' phrasing.

DimensionReasoningScore

Conciseness

The body is lean and assumes Claude's competence without explaining basic concepts, with only minor phrasing that could be tightened, fitting the 'efficient; minor instances' anchor rather than the perfectly lean 5.

4 / 5

Actionability

Guidance is high-level and abstract (e.g. 'Verify the local package, checkpoint, endpoint, or notebook route') with no executable code, commands, or specific API calls, matching the 'minimal concrete guidance; high-level hints' anchor.

2 / 5

Workflow Clarity

Steps are clearly sequenced but lack explicit validation checkpoints, and the judging guidelines cap batch/embedding-generating workflows without verification at 3.

3 / 5

Progressive Disclosure

For a short single-purpose skill with no bundle files, the well-organized sectioned overview meets the simple-skill exception for a top progressive-disclosure score.

5 / 5

Total

14

/

20

Passed

Description

87%Weight 40%Scale 1-5

Based on the skill's description, can an agent find and select it at the right time? Clear, specific descriptions lead to better discovery.

A well-constructed description that names a specific domain and concrete capabilities and pairs them with an explicit 'Use when' trigger. It is concise, third-person, and low-conflict.

DimensionReasoningScore

Specificity

Lists several concrete actions (embeddings, mutation scoring, remote homology, representation analysis) with minor coverage gaps, matching the 'several specific actions; minor gaps' anchor rather than the comprehensive 5.

4 / 5

Completeness

Clearly states both what it does ('Use ESM2 ... for embeddings, mutation scoring ...') and an explicit 'Use when a task needs ...' trigger clause, matching the explicit what-and-when anchor.

5 / 5

Trigger Term Quality

Good natural keyword coverage including 'protein embeddings', 'zero-shot variant scores', 'clustering', but misses some synonyms and file-extension style terms that would push it to 5.

4 / 5

Distinctiveness Conflict Risk

Targets a clear niche (ESM2 protein language models) with distinct triggers and minimal overlap risk with other skills.

5 / 5

Total

18

/

20

Passed

Validation

100%

Checks the skill against the spec for correct structure and formatting. All validation checks must pass before discovery and implementation can be scored.

Validation16 / 16 Passed

Validation for skill structure

No warnings or errors.

Repository
companion-inc/feynman
Reviewed

Table of Contents

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