openfold3
Run or plan OpenFold3-style structure prediction workflows. Use when a task asks for open protein or complex prediction, setup, model comparison, or reproducibility around OpenFold-family outputs.
65
Quality
78%
Does it follow best practices?
Run evals on this skill
Adds up to 20 points to the overall score
View guide
Securityby
Passed
No findings from the security scan
Fix and improve this skill with Tessl
tessl review fix ./skills/openfold3/SKILL.mdOpenFold3
Use this skill for OpenFold-family structure prediction or comparison.
Workflow:
- Normalize FASTA, chains, templates, MSAs, ligands or partners, seeds, and expected output format.
- Verify model code, checkpoints, databases, and GPU route before running.
- Save the input manifest, environment lockfile, command, logs, structure outputs, confidence files, and runtime metadata.
- Compare against AlphaFold-style, ESMFold-style, PDB, or literature evidence when the result affects a decision.
- Report reproducibility gaps such as missing databases, unavailable weights, failed templates, or route-specific approximations.
Do not present an OpenFold-family output without version and input provenance.
- Repository
- companion-inc/feynman
- Commit
95c51d9
- Last updated
- First committed
Is this your skill?
If you maintain this skill, you can claim it as your own. Once claimed, you can manage eval scenarios, bundle related skills, attach documentation or rules, and ensure cross-agent compatibility.