reactome-database
Query the Reactome database (Analysis and Content Services). Use when the user asks about pathway analysis, gene list enrichment, retrieving results by token, finding unmapped or not-found identifiers, mapping identifiers, reaction participants (inputs, outputs), pathway hierarchy (including top-level pathways), diagram export, cross-reference mapping, or searching the knowledgebase.
66
78%
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High
Do not use without reviewing
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tessl review fix ./skills/reactome_database/SKILL.mdSecurity
1 high severity finding. You should review these findings carefully before considering using this skill.
W007: Insecure credential handling detected in skill instructions.
What this means
The skill handles credentials insecurely by requiring the agent to include secret values verbatim in its generated output. This exposes credentials in the agent’s context and conversation history, creating a risk of data exfiltration.
Why it was flagged
The skill shows CLI commands that require passing analysis "tokens" via a --token argument (placeholders like TOKEN), which would force an agent to embed secret token values verbatim into generated commands/outputs to retrieve or download results, creating an exfiltration risk.
Low
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
High: the runtime path performs GET/POST to Reactome endpoints and reads outsider-fetched JSON/text (`scripts/reactome_analysis.py` → `_CLIENT.fetch_text` / `fetch_bytes`, then `json.loads(result)` and `_write_output`), which can include arbitrary text fields that could be repackaged into the agent’s subsequent LLM context.
- Repository
- google-deepmind/science-skills
- Commit
0b42509
- Audited
- Security analysis
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