tooluniverse-cancer-genomics-tcga
TCGA/GDC cancer genomics analysis — cohort construction, clinical metadata retrieval, somatic mutation frequencies, survival analysis, and multi-omics integration. Use for TCGA-BRCA-style cohort studies, mutation prevalence by cancer type, survival-by-mutation analysis, and pan-cancer driver discovery. Always cancer-type-specific (don't use pan-cancer counts without cohort context).
The canonical home for this skill is tooluniverse-cancer-genomics-tcga in mims-harvard/ToolUniverse
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