tooluniverse-chemical-compound-retrieval
Retrieve chemical compound data from PubChem and ChEMBL with disambiguation, cross-referencing, and stereochemistry handling. Use for resolving compound names to SMILES/InChI/CID/ChEMBL IDs (including OPSIN deterministic IUPAC-name-to-structure parsing), fetching molecular properties, distinguishing isomers/stereo forms, and cross-validating identity across databases. Always use English compound names; flags ambiguous queries (e.g., Vitamin D has multiple forms).
77
96%
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Low
Low-risk findings worth noting
Low
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
The skill’s runtime accepts the user’s compound name/SMILES (outsider-authored free text) as the `name`/`compound_name`/`smiles` parameter and then ingests it to call PubChem/ChEMBL/OPSIN lookup tools during Phase 1 (e.g., `PubChem_get_CID_by_compound_name`, `OPSIN_name_to_structure`, `PubChem_get_CID_by_SMILES`, `ChEMBL_search_molecules`).
- Repository
- mims-harvard/ToolUniverse
- Commit
089eb8e
- Audited
- Security analysis
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