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tooluniverse-crispr-screen-analysis

Analyze CRISPR-Cas9 genetic screens — MAGeCK gene-level scores, sgRNA count QC, replicate correlation, hit prioritization, and pathway GSEA on screen output. Use for genome-wide essentiality screens, synthetic-lethality discovery, dropout vs positive-selection screen analysis, target identification, and resistance-screen interpretation. Includes screen-QC and statistical thresholds.

Quality

85%

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SecuritybySnyk

Low

Low-risk findings worth noting

The canonical home for this skill is tooluniverse-crispr-screen-analysis in mims-harvard/ToolUniverse

SKILL.md
Quality
Evals
Security
Low

W011: Third-party content exposure detected (indirect prompt injection risk).

What this means

The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.

Why it was flagged

The required workflow uses PubMed to search for literature articles based on query terms, which constitutes reading external search results containing free text.

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Repository

mims-harvard/ToolUniverse

Path

plugins/tooluniverse/skills/tooluniverse-crispr-screen-analysis/SKILL.md

Audited
Security analysis
Snyk

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