tooluniverse-proteomics-data-retrieval
Find and retrieve proteomics datasets from MassIVE and ProteomeXchange. Search by species, keyword, or accession; retrieve detailed metadata (instruments, publications, species, PTMs studied). Use for locating public proteomics datasets to reanalyze, comparing instrument/protocol coverage across studies, and pre-download dataset evaluation.
70
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Low
Low-risk findings worth noting
Low
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
At runtime, the workflow takes outsider-supplied user search inputs (keyword/species/accession) and passes them into MassIVE_search_datasets/ProteomeXchange_search_datasets and then calls MassIVE_get_dataset/ProteomeXchange_get_dataset to ingest repository-returned dataset metadata (titles/summaries/keywords/modifications/publications) in response to that query.
- Repository
- mims-harvard/ToolUniverse
- Commit
089eb8e
- Audited
- Security analysis
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