biopython
Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices.
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High
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Security
1 high severity finding. You should review these findings carefully before considering using this skill.
W007: Insecure credential handling detected in skill instructions.
What this means
The skill handles credentials insecurely by requiring the agent to include secret values verbatim in its generated output. This exposes credentials in the agent’s context and conversation history, creating a risk of data exfiltration.
Why it was flagged
The skill shows embedding an API key as a literal in code (Entrez.api_key = "your_api_key_here"), which encourages placing secrets directly into generated code/outputs and could require the LLM to echo real secret values verbatim.
- Repository
- synthetic-sciences/openscience
- Commit
52845c3
- Audited
- Security analysis
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