pdb-database
Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.
61
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Low
Low-risk findings worth noting
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tessl review fix ./backend/cli/skills/databases/pdb-database/SKILL.mdLow
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
The required workflow describes downloading PDB/mmCIF text files from RCSB at runtime (e.g., `requests.get(...).text` / `f.write(response.text)`), which is outsider-authored free text from a public web source that could be ingested into the LLM context.
- Repository
- synthetic-sciences/openscience
- Commit
dc00e07
- Audited
- Security analysis
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