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string-database

Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.

54

Quality

62%

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SecuritybySnyk

Low

Low-risk findings worth noting

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tessl review fix ./backend/cli/skills/databases/string-database/SKILL.md
SKILL.md
Quality
Evals
Security

Low

Low-risk findings.

1 low severity finding. Worth noting, but not necessarily harmful.

Low

W011: Third-party content exposure detected (indirect prompt injection risk).

What this means

The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.

Why it was flagged

Outsider-provided free text can only be ingested if a user supplies protein identifiers that are sent as request parameters to STRING endpoints (e.g., `/api/tsv/get_string_ids`, `/api/tsv/network`), and the skill does not read any outsider-authored content from a queue/feed or arbitrary pages by itself.

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Repository
synthetic-sciences/openscience
Audited
Security analysis
Snyk

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