geo-database
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
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Low
Low-risk findings worth noting
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tessl review fix ./skills/bio/geo-database/SKILL.mdLow
Low-risk findings.
1 low severity finding. Worth noting, but not necessarily harmful.
W011: Third-party content exposure detected (indirect prompt injection risk).
What this means
The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.
Why it was flagged
SKILL.md describes a runtime workflow that uses NCBI E-utilities (Entrez.esearch/efetch) and GEOparse to fetch GEO records, metadata, and SOFT/MINiML/series matrix files that originate from first-party submissions by third parties (outsider-authored GEO content), which the agent would parse as free text at ingestion time.
- Repository
- wu-yc/LabClaw
- Commit
df37802
- Audited
- Security analysis
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