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medical-research-skills

github.com/aipoch/medical-research-skills

SkillAddedReview
mechanism-to-validation-planner

awesome-med-research-skills/Protocol Design/mechanism-to-validation-planner/SKILL.md

Extends a mechanistic or association-level biomedical finding into a staged validation pathway that moves from descriptive evidence toward stronger functional support, mechanistic specificity, and clinical relevance. Use this skill when a user has a pathway, biomarker, cell-state, target, mechanism, or association finding and needs to decide what should be validated next, in what order, and which evidence layers are necessary versus optional. Do not default to maximal validation stacks. Build a structured validation ladder with a primary route, stronger upgrade route, and optional extensions.

65

medchem

scientific-skills/Evidence Insight/medchem/SKILL.md

Medicinal chemistry screening filters for compound prioritization; use when you need to apply drug-likeness rules, PAINS/structural alerts, and complexity metrics to triage or optimize libraries.

65

medical-case-interpreter

scientific-skills/Other/medical-case-interpreter/SKILL.md

Generates compliant medical case report articles for WeChat.

48

medical-case-report-generator

scientific-skills/Other/medical-case-report-generator/SKILL.md

Generates a patient-friendly medical case report tweet from case images and disease name. Use when the user provides a medical case image and wants a structured report or tweet.

55

medical-cv-resume-builder

scientific-skills/Academic Writing/medical-cv-resume-builder/SKILL.md

Use medical cv resume builder for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

43

medical-device-mdr-auditor

scientific-skills/Academic Writing/medical-device-mdr-auditor/SKILL.md

Audit medical device technical files against EU MDR 2017/745 regulations.

50

medical-email-polisher

scientific-skills/Academic Writing/medical-email-polisher/SKILL.md

Transforms rough email drafts into polished, professional medical correspondence.

44

medical-english-precision-editor

awesome-med-research-skills/Academic Writing/medical-english-precision-editor/SKILL.md

Improves medical English precision without changing the underlying facts, evidence boundaries, or intended scientific meaning.

49

medical-imaging-review

scientific-skills/Academic Writing/medical-imaging-review/SKILL.md

Write comprehensive literature reviews for medical imaging AI research. Use when writing survey papers, systematic reviews, or literature analyses on topics like segmentation, detection, classification in CT, MRI, X-ray, ultrasound, or pathology imaging. Triggers on requests f...

68

medical-research-algorithm-matcher

awesome-med-research-skills/Protocol Design/medical-research-algorithm-matcher/SKILL.md

Matches a user’s biomedical research direction, disease problem, study aim, data modality, and resource constraints to the most relevant recent algorithms and method papers. Always search real recent algorithm literature first, prioritize the last 12 months, expand to 1–3 years only when needed, and add canonical baselines only when necessary. Every formal algorithm recommendation must include the verified primary method paper, plus published downstream papers that actually cite/use the algorithm when such papers are found, with DOI when available. Never fabricate papers, algorithm names, authors, journals, years, DOI, PMID, links, or benchmark claims. If no directly verified algorithm paper is found, say so explicitly.

62

medical-research-gap-finder

awesome-med-research-skills/Evidence Insight/medical-research-gap-finder/SKILL.md

Identifies real, evidence-audited, topic-specific research gaps in medical research by first retrieving and verifying literature from trusted sources, then mapping the current evidence landscape, rejecting pseudo-gaps, and converting only medium/high-confidence gaps into study-ready research opportunities. Always require real literature retrieval before formal gap claims. Never fabricate references, metadata, or findings.

58

medical-research-gap-to-study-planner

awesome-med-research-skills/Protocol Design/medical-research-gap-to-study-planner/SKILL.md

Converts an audited medical research gap into a complete, structured, gap-traceable study design. Always use this skill whenever a user already has one or more candidate research gaps and wants to transform them into an executable biomedical research plan rather than re-run broad topic ideation. Covers six gap-to-design patterns (evidence-completion, mechanism-resolution, cell-state/context-mapping, translation-bridge, causality-upgrade, population/stage-specific) and always outputs one recommended primary protocol, a gap-to-design dependency map, step-by-step workflow, figure plan, validation strategy, minimal executable version, publication upgrade path, and verified design-support literature rules. Never fabricate references. Preserve claim-evidence discipline and do not replace a topic-specific gap with a generic workflow.

69

medical-research-literature-reader-pro

awesome-med-research-skills/Evidence Insight/medical-research-literature-reader-pro/SKILL.md

A medical-research-native literature reading skill for users with clinical, bioinformatics, translational, and basic experimental backgrounds. Use this skill whenever a user wants to read, analyze, critique, or interpret a medical or scientific paper — whether they provide a PDF, abstract, DOI, PMID, or just a title. Triggers include requests like \"analyze this paper\", \"critique this study\", \"is this a strong paper?\", \"give me similar studies\", \"prepare me for journal club\", \"help me understand this bioinformatics paper\", \"what are the weaknesses here?\", or \"turn this into a mind map\". Also activate for any downstream deliverables such as journal club kits, comparison tables, PI decision briefs, replication starters, or follow-up experiment designs. Do NOT treat as a generic summarizer — this skill performs structured evidence-type classification, track-specific critical appraisal, interpretation-boundary judgment, and research-grade follow-up generation.

72

medical-review-writer-architect

scientific-skills/Academic Writing/medical-review-writer-architect/SKILL.md

A multi-stage workflow for writing long-form medical reviews; used when the user needs to build an outline based on PubMed literature, write chapter by chapter, perform supplementary searches, and format citations; input is the review topic and project directory, output is a c...

72

medical-scribe-dictation

scientific-skills/Academic Writing/medical-scribe-dictation/SKILL.md

Convert physician verbal dictation into structured SOAP notes. Trigger.

49

medical-topic-saturation-and-whitespace-checker

awesome-med-research-skills/Evidence Insight/medical-topic-saturation-and-whitespace-checker/SKILL.md

Maps whether a biomedical research topic, subtopic, or study angle is truly saturated, superficially crowded, strategically occupied, or still open for differentiated entry. Use this skill when a user wants to know whether a hot medical research direction is already overworked, whether meaningful whitespace remains, whether major groups have already occupied the obvious claims, and whether the timing window is still open. Always distinguish popularity from true saturation, and distinguish cosmetic novelty from meaningful differentiating entry.

70

medical-translation

scientific-skills/Academic Writing/medical-translation/SKILL.md

Use medical translation for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

48

medical-unit-converter

scientific-skills/Other/medical-unit-converter/SKILL.md

Convert medical laboratory values between units (mg/dL to mmol/L, etc.) with formula transparency and clinical reference ranges. Supports glucose, cholesterol, creatinine, and hemoglobin conversions.

57

medical-vector-search

scientific-skills/Evidence Insight/medical-vector-search/SKILL.md

Vector database retrieval and evidence-based answering for medical research topics. Use when users need knowledge-base-backed answers about methodology, disease mechanisms, drug effects, clinical research, or research tools. Input is a medical research question; output is a st...

64

medication-adherence-message-gen

scientific-skills/Academic Writing/medication-adherence-message-gen/SKILL.md

Use medication adherence message gen for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

41

medication-reconciliation

scientific-skills/Other/medication-reconciliation/SKILL.md

Compare patient pre-admission medication lists with inpatient orders to automatically identify omitted or duplicated medications and improve medication safety.

60

meeting-assistant

scientific-skills/Other/meeting-assistant/SKILL.md

Extracts key meeting information in chronological order and outputs decisions and action items; use when you need meeting minutes, action tracking, or project sync notes from transcripts or raw notes.

59

meeting-minutes

scientific-skills/Academic Writing/meeting-minutes/SKILL.md

Use meeting minutes for other workflows that need structured execution, explicit assumptions, and clear output boundaries.

40

meeting-minutes-generator

scientific-skills/Other/meeting-minutes-generator/SKILL.md

Generates structured meeting minutes from text transcripts. Use when the user provides text content and wants a structured summary with a signature.

57

mendel

awesome-med-research-skills/Other/mendel/SKILL.md

Gregor Mendel — genetics mentor, patient experimenter, and gardener-monk. Trigger this skill when users ask about genetics, heredity, inheritance patterns, Mendelian laws, dominant/recessive traits, gene segregation, independent assortment, Punnett squares, classical genetics, or evolution-genetics connections. Also trigger when discussing the philosophy of science, how great ideas get ignored, the relationship between faith and science, or the virtue of patient long-term observation. Even if the user doesn't say "Mendel" explicitly, trigger this skill for questions touching genetics, breeding, trait inheritance, or genomics history. Part of the AIPOCH Science Mentor Skill Hub.

68