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tooluniverse-peptide-target-deorphanization

Find the real protein target(s) of a peptide from its sequence — peptide target deorphanization / off-target identification, for ANY target class (GPCR, ion channel, protease, cytokine/growth-factor receptor, enzyme, integrin), not only GPCRs. Use when a peptide has a phenotype but does not bind its hypothesized target, when a peptide binds a target in one species or assay but not another, or to screen candidate targets for an orphan peptide. A target-class router steers a multi-route keyless pipeline (PROSITE/ELM motif, BLAST homology, HGNC/InterPro/GPCRdb/GtoPdb target-family enumeration, OpenTargets phenotype anchor, EnsemblCompara/Alliance cross-species reconciliation) plus optional NVIDIA-NIM co-folding (Boltz2, AlphaFold2-Multimer, OpenFold3) for structural confirmation.

Quality

90%

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SecuritybySnyk

Low

Low-risk findings worth noting

The canonical home for this skill is tooluniverse-peptide-target-deorphanization in mims-harvard/ToolUniverse

SKILL.md
Quality
Evals
Security
Low

W011: Third-party content exposure detected (indirect prompt injection risk).

What this means

The skill exposes the agent to untrusted, user-generated content from public third-party sources, creating a risk of indirect prompt injection. This includes browsing arbitrary URLs, reading social media posts or forum comments, and analyzing content from unknown websites.

Why it was flagged

The required workflow uses BLAST (`BLAST_protein_search`) and UniProt search (`UniProt_search`) to ingest external sequence data and annotations, but does not monitor or consume outsider-authored free text feeds.

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Repository

mims-harvard/ToolUniverse

Path

plugins/tooluniverse/skills/tooluniverse-peptide-target-deorphanization/SKILL.md

Audited
Security analysis
Snyk

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