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medical-research-skills

github.com/aipoch/medical-research-skills

Skill

Added

Review

drug-interaction-checker

Check for drug-drug interactions between multiple medications. Trigger when user asks about medication compatibility, "can I take X with Y", drug interactions, contraindications, or safety of combining pharmaceuticals.

poster-layout-planner

Plans layout and content distribution for academic posters.

journal-matchmaker

Recommend suitable high-impact factor or domain-specific journals for manuscript submission based on abstract content. Trigger when user provides paper abstract and asks for journal recommendations, impact factor matching, or scope alignment suggestions.

synthetic-bio-circuit-designer

Design gene circuits for synthetic biology applications

bio-ontology-mapper

Map unstructured biomedical text to standardized ontologies (SNOMED CT, MeSH, ICD-10) for terminology normalization and semantic interoperability. Extracts medical entities and maps to standardized codes with confidence scoring.

networking-email-drafter

Draft professional follow-up emails to contacts made at conferences

peer-review-response-drafter

Assist in drafting professional peer review response letters. Trigger when user mentions "reviewer comments", "response letter", "peer review", "revise and resubmit", "R&R", "reviewer feedback", or needs help responding to academic journal reviewers.

3d-molecule-ray-tracer

Generate photorealistic rendering scripts for PyMOL and UCSF ChimeraX to create publication-quality molecular visualizations. Supports ray-tracing, depth of field, ambient occlusion, and cinematic lighting for journal covers and high-impact figures. Use for creating visually compelling protein structure images; not for routine structural analysis or measurements.

table-1-generator

Automated baseline characteristics table generation for clinical papers

crispr-screen-analyzer

Process CRISPR screening data to identify essential genes and hit candidates. Performs quality control, log fold change calculation, z-score-based sgRNA scoring, and hit calling for pooled CRISPR screens including viability, drug resistance, and synthetic lethality studies.

clinical-data-cleaner

Clean and standardize clinical trial data to CDISC SDTM standards for FDA/EMA regulatory submissions. Handles missing values, outlier detection, date standardization, and generates audit trails for DM, LB, and VS domains.

outlier-detection-handler

Identify and handle statistical outliers in datasets using z-score, IQR, or Grubbs methods with regulatory-ready documentation.

linkedin-optimizer

Use when optimizing LinkedIn profiles for doctors, physicians, nurses, healthcare professionals, or medical researchers. Crafts compelling headlines, writes professional summaries, integrates healthcare keywords, and builds personal branding for medical careers.

dashboard-design-for-trials

Design dashboard layout sketches for clinical trials showing enrollment progress and adverse event rates

q-and-a-prep-partner

Predict challenging questions for presentations and prepare responses

funding-trend-forecaster

Predict funding trend shifts using NLP analysis of grant abstracts from NIH, NSF, and Horizon Europe

authorship-credit-gen

Use when determining author order on research manuscripts, assigning CRediT contributor roles for transparency, documenting individual contributions to collaborative projects, or resolving authorship disputes in multi-institutional research. Generates fair and transparent authorship assignments following ICMJE guidelines and CRediT taxonomy. Helps research teams document contributions, resolve disputes, and ensure equitable credit distribution in academic publications.

conference-poster-pitch

Generate elevator pitch for conference posters

study-limitations-drafter

Transform study design flaws into professional limitation statements

facs-gating-viz-style

Beautify flow cytometry gating plots for publication. Applies contour, density, or dot plot styles to FCS data and produces publication-ready figures with consistent formatting.

alumni-career-tracker

Analyze laboratory alumni career trajectories and outcomes to provide data-driven career guidance for current students and postdocs. Tracks industry vs academia distribution, identifies career pathways, and generates personalized recommendations based on degree level and research interests.

forest-plot-styler

Beautify meta-analysis forest plots with customizable odds ratio points, confidence interval styles, and subgroup analysis support. Outputs PNG, PDF, or SVG.

cover-letter-drafter

Generates professional cover letters for journal submissions and job applications in medical and academic contexts.

figure-reference-checker

Check figure references in manuscripts

conflict-of-interest-checker

Check for co-authorship conflicts between authors and suggested reviewers